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agent-memory-ultimate

Production-ready memory system โ€” daily logs, sleep consolidation, SQLite + FTS5, WhatsApp/ChatGPT/VCF importers. Human-inspired architecture

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Agent Memory Ultimate

Cut your agent's token usage by 60-80%. Stop reading entire files into context โ€” store memories once, recall only what's relevant. Vector search, knowledge graphs, automatic decay, and RAPTOR hierarchies give your agent human-like memory that actually scales.

Zero cloud APIs. Zero costs. Everything runs locally.


Why Token Savings Matter

Every time your agent reads MEMORY.md or a daily log, that's thousands of tokens burned on context. Most of it is irrelevant to the current question.

Approach Tokens per recall Precision
Read entire MEMORY.md 3,000-10,000 ~5% relevant
Read daily log + MEMORY.md 5,000-20,000 ~10% relevant
mem.py recall "query" 200-800 ~80% relevant
mem.py primed-recall (context-aware) 300-1,000 ~90% relevant

On a typical agent doing 50 recalls/day:

  • Old way: ~500K tokens/day on memory reads
  • With v3: ~30K tokens/day
  • Savings: ~470K tokens/day (~$7-14/day on API, or significant Claude Max headroom)

The agent gets better answers with less context pollution.


What's New in v3

v2 was markdown files + FTS5 keyword search. v3 adds a full cognitive architecture:

Feature v2 v3
Storage Markdown files SQLite + sqlite-vec embeddings
Search FTS5 keyword only Hybrid (vector + keyword + BM25)
Recall Read entire files Precise snippets via 6 strategies
Associations None Knowledge graph with multi-hop traversal
Hierarchy Flat files RAPTOR tree (L0โ†’L1โ†’L2โ†’L3 abstraction)
Decay Manual cleanup Automatic strength decay + half-life
Consolidation Cron text prompt Clustering + merging + hierarchy rebuild
Context priming None Spreading activation from conversation
Sharing None Cross-agent with sensitivity gates
Token cost High (full file reads) Low (targeted retrieval)

v2 still works. Markdown files, daily logs, MEMORY.md โ€” all unchanged. v3 adds a parallel cognitive layer that dramatically reduces token waste.


Architecture

โ”Œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”
โ”‚         Agent Session               โ”‚
โ”‚  (reads MEMORY.md, daily logs)      โ”‚  โ† v2 (unchanged)
โ”œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ค
โ”‚         mem.py CLI                  โ”‚  โ† v3 (NEW)
โ”‚  store / recall / consolidate       โ”‚
โ”œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ฌโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ฌโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ค
โ”‚ sqlite-vecโ”‚  FTS5   โ”‚ Association   โ”‚
โ”‚ (vectors) โ”‚(keyword)โ”‚   Graph       โ”‚
โ”œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ดโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ดโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ค
โ”‚            memory.db                โ”‚
โ”‚  memories, associations, hierarchy  โ”‚
โ”‚  shares, embeddings (384-dim)       โ”‚
โ””โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”˜
  • Embedding model: all-MiniLM-L6-v2 (384 dimensions, ~80MB, ONNX)
  • Vector search: sqlite-vec โ€” no Pinecone, no Weaviate, no cloud
  • Database: db/memory.db (one file, portable, backupable)

Quick Start

# 1. Initialize database
python3 scripts/mem.py init

# 2. Start the local embedding server (port 9999)
bash scripts/start-memory.sh

# 3. Store a memory
python3 scripts/mem.py store "Oscar prefers wired home automation" --type semantic --importance 0.8

# 4. Recall it (200 tokens instead of 10,000)
python3 scripts/mem.py recall "home automation preferences"

That's it. Your agent now has precise memory retrieval.


6 Recall Strategies

Not all queries are the same. Use the right strategy:

Strategy Best For Command When
Hybrid (default) General recall mem.py recall "query" Most queries
Vector Semantic similarity recall --strategy vector Fuzzy, conceptual
Keyword Exact terms, IDs recall --strategy keyword File names, codes
Adaptive Auto-selects detail mem.py recall-adaptive "query" Exploratory
Graph Follow connections mem.py recall-assoc "query" --hops 2 Related concepts
Primed Context-aware mem.py primed-recall "q" --context "..." Mid-conversation

Primed recall is the killer feature โ€” pass the last 2-3 user messages as context and results are biased toward what's conversationally relevant. This is how human memory works.


CLI Reference

Core Commands

Command Description
mem.py init Create database schema
mem.py migrate Import existing documents from jarvis.db
mem.py store <content> [--type TYPE] [--source SRC] [--importance N] Store a memory
mem.py recall <query> [--strategy hybrid|vector|keyword] [--limit N] Search memories
mem.py forget <id|--query QUERY> Soft-delete (strength โ†’ 0)
mem.py hard-delete <id> Permanently remove
mem.py stats Database statistics

Memory types: episodic (events), semantic (facts), procedural (how-to), preference (user preferences)

Knowledge Graph

Command Description
mem.py associate <src_id> <tgt_id> [--type TYPE] [--weight N] Link two memories
mem.py links <memory_id> Show all associations
mem.py recall-assoc <query> [--hops N] [--limit N] Multi-hop traversal
mem.py graph-stats Graph statistics

Edge types: related, caused_by, part_of, contradicts, temporal, supports

RAPTOR Hierarchy

Command Description
mem.py build-hierarchy [--levels N] Build abstraction tree
mem.py recall-adaptive <query> [--detail auto|broad|specific|0-3] Recall at right abstraction level
mem.py hierarchy-stats Show hierarchy structure

Broad queries ("what do I know about AI?") match high-level summaries. Specific queries ("sqlite-vec version") match leaf nodes. Adaptive auto-selects.

Spreading Activation

Command Description
mem.py primed-recall <query> [--context 'text1' 'text2'] [--limit N] Context-primed recall

Cross-Agent Sharing

Command Description
mem.py share <memory_id> --with <agent> [--sensitivity N] Share a memory
mem.py shared [--from AGENT] [--to AGENT] List shares
mem.py revoke <share_id> | --memory <id> Revoke access

Sensitivity levels: 0 (public) โ†’ 5 (top secret). Default gate: โ‰ค 3. Both agents must consent.

Maintenance

Command Description
mem.py consolidate [--days N] [--decay-only] Full consolidation cycle

Runs: decay โ†’ cluster โ†’ merge duplicates โ†’ rebuild hierarchy.


Daily Cycle

Wake Up

1. Read SOUL.md, USER.md (identity โ€” small, always load)
2. Read today's daily log (recent context)
3. Use `mem.py primed-recall "session start"` for relevant memories
   โ†’ Gets 200-800 tokens of precisely relevant context
   โ†’ Instead of 10,000+ tokens from reading MEMORY.md cover-to-cover

During Day

# Store important facts as they come up
mem.py store "Client meeting moved to March 1" --type episodic --importance 0.7

# Before answering from memory โ€” recall, don't read files
mem.py recall "client meeting schedule"

# Link related memories when you notice connections
mem.py associate 42 87 --type related

Sleep Cycle (Nightly Consolidation)

{
  "schedule": { "kind": "cron", "expr": "0 3 * * *", "tz": "America/Los_Angeles" },
  "payload": {
    "kind": "agentTurn",
    "message": "Run memory consolidation: python3 scripts/mem.py consolidate --days 7"
  },
  "sessionTarget": "isolated"
}

What consolidation does:

  1. Decay โ€” Unaccessed memories lose strength (half-life: 30 days)
  2. Cluster โ€” Groups similar memories
  3. Merge โ€” Combines near-duplicates (saves storage + tokens)
  4. Rebuild hierarchy โ€” Updates RAPTOR tree for better adaptive recall

File Structure

workspace/
โ”œโ”€โ”€ MEMORY.md              # Long-term curated memory (v2, still works)
โ”œโ”€โ”€ SOUL.md                # Identity & personality
โ”œโ”€โ”€ USER.md                # Human profile
โ”œโ”€โ”€ db/
โ”‚   โ”œโ”€โ”€ agent.db           # Contacts/history (v2)
โ”‚   โ””โ”€โ”€ memory.db          # Cognitive memory (v3)
โ”œโ”€โ”€ bank/
โ”‚   โ”œโ”€โ”€ entities/          # People profiles
โ”‚   โ”œโ”€โ”€ contacts.md        # Quick contact reference
โ”‚   โ””โ”€โ”€ opinions.md        # Preferences, beliefs
โ””โ”€โ”€ memory/
    โ”œโ”€โ”€ YYYY-MM-DD.md      # Daily logs
    โ”œโ”€โ”€ projects/           # Project notes
    โ””โ”€โ”€ knowledge/          # Topic docs

Comparison: Why This Over Alternatives

Feature Read files (default) Basic RAG Agent Memory Ultimate v3
Token cost per recall 3K-20K 500-2K 200-800
Precision ~5-10% ~50% ~80-90%
Associations โŒ โŒ โœ… Knowledge graph
Abstraction levels โŒ โŒ โœ… RAPTOR hierarchy
Context priming โŒ โŒ โœ… Spreading activation
Automatic decay โŒ โŒ โœ… Configurable half-life
Cross-agent sharing โŒ โŒ โœ… With sensitivity gates
Cloud dependency None Usually None โ€” fully local
Setup complexity Zero High mem.py init + one script

Data Sources (v2 Importers)

Source Command
WhatsApp contacts/groups python3 scripts/sync_whatsapp.py
ChatGPT conversations python3 scripts/init_db.py (auto-detects chatgpt-export/)
Phone contacts (VCF) python3 scripts/import_vcf.py contacts.vcf
Existing markdown files python3 scripts/mem.py migrate

Dependencies

pip3 install scipy tokenizers onnxruntime numpy sqlite-vec

That's it. No Pinecone. No Weaviate. No Docker. No API keys. ~80MB embedding model downloaded once.


Cognitive Science

This isn't arbitrary architecture โ€” it's modeled on how human memory actually works:

Human Process Agent Equivalent
Working memory primed-recall (conversation-biased)
Long-term declarative store + vector embeddings
Episodic memory Daily logs + episodic memories
Semantic memory MEMORY.md + semantic memories
Sleep consolidation consolidate (decay + cluster + merge)
Forgetting curve Strength decay with half-life
Association Knowledge graph with typed edges
Abstraction RAPTOR hierarchy (concrete โ†’ abstract)
Spreading activation Context primes related memories

Tips

  1. Importance scores matter โ€” 0.9+ for core identity, 0.5 for routine facts. Higher = survives decay longer.
  2. Associate liberally โ€” More edges = better graph traversal. Link when you notice connections.
  3. Let decay work โ€” Forgetting is a feature. Unaccessed memories fading keeps recall precise.
  4. Primed recall for conversations โ€” Pass last 2-3 messages as context. Dramatically better results.
  5. Rebuild hierarchy weekly โ€” build-hierarchy after storing many new memories.
  6. Start with hybrid โ€” Only switch to pure vector/keyword when hybrid misses.

Credits

Created by Oscar Serra with the help of Claude (Anthropic).

Because waking fresh each session shouldn't mean burning 20K tokens to remember who you are.